Update Submitted Samples with Sample Clauses

Update Submitted Samples with a CDC ID This script is needed on a Utility Step to facilitate the update of the GC ID field with an entry received from the CDC. The ID is required, nominally, by the time sequencing begins. The script will permit the upload of a file containing the LIMS IDs of the samples for which the GC ID has been assigned; the script will update the applicable Submitted Sample UDF with that entry. The Sample Sheet generated for the ARLN workflow will use that entry. If the value is not available at the time of Sample Sheet creation, then there is a manual workaround for the Bioinformaticians outside of Clarity. It would be best if Clarity could create the file/list that is sent to the CDC so that the Submitted Sample LIMS ID is part of the file and will simplify the parsing back of the IDs in the returned file. Alternatively, UPHL can add the values manually through the OOTB “Add Samples” or “Modify Samples” functionalities available in the Projects and Samples tab. Dev Estimation = 2 days
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