Perlegen Sciences Inc Sample Contracts

PERLEGEN SCIENCES, INC. INDEMNIFICATION AGREEMENT
Indemnification Agreement • April 10th, 2006 • Perlegen Sciences Inc • Delaware

THIS AGREEMENT is entered into, effective as of , 2006 by and between Perlegen Sciences, Inc., a Delaware corporation (the “Company”), and (“Indemnitee”), effective as of the date that the Registration Statement on Form S-1 related to the initial public offering of the Company’s Common Stock is declared effective by the United States Securities and Exchange Commission.

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PERLEGEN SCIENCES, INC. AMENDMENT NO. 1 TO SECOND AMENDED AND RESTATED STOCKHOLDERS’ AGREEMENT
Stockholders’ Agreement • April 10th, 2006 • Perlegen Sciences Inc

THIS AMENDMENT NO. 1 to the Second Amended and Restated Stockholders’ Agreement is made as of December 22, 2005 (the “Effective Date”), between Perlegen Sciences, Inc. a Delaware corporation (the “Company”), the holders of the Company’s Common Stock and Series A Preferred Stock (each an “Investor” and collectively the “Investors”), and the holders of the Company’s Series B Preferred Stock, Series C Preferred Stock, and Series D Preferred Stock (each an “Prior Purchaser” and collectively the “Prior Purchasers”).

PERLEGEN SCIENCES, INC. AMENDMENT NO. 1 TO SECOND AMENDED AND RESTATED REGISTRATION RIGHTS AGREEMENT
Registration Rights Agreement • April 10th, 2006 • Perlegen Sciences Inc

THIS AMENDMENT NO. 1 to the Second Amended and Restated Registration Rights Agreement is made as of December 22, 2005 (the “Effective Date”), between Perlegen Sciences, Inc. a Delaware corporation (the “Company”), and the holders of the Company’s Preferred Stock (each an “Prior Purchaser” and collectively the “Prior Purchasers”).

SECOND AMENDED AND RESTATED REGISTRATION RIGHTS AGREEMENT Dated as of February 1, 2005 By and Among PERLEGEN SCIENCES, INC. and THE HOLDERS OF SERIES A, SERIES B, SERIES C AND SERIES D PREFERRED STOCK
Registration Rights Agreement • April 10th, 2006 • Perlegen Sciences Inc • California

THIS SECOND AMENDED AND RESTATED REGISTRATION RIGHTS AGREEMENT, dated as of February 1, 2005 (the “Agreement”), by and among Perlegen Sciences, Inc., a Delaware corporation (the “Company”), and the holders of the Company’s Series A Preferred Stock, par value $0.0001 per share (the “Series A Stock”), the Company’s Series B Preferred Stock, par value $0.0001 per share (the “Series B Stock”), the Company’s Series C Preferred Stock, par value $0.0001 per share (the “Series C Stock”), and the Company’s Series D Preferred Stock par value $0.0001 per share (the “Series D Stock”), and set forth on Schedule I attached hereto.

SHORELINE TECHNOLOGY PARK MOUNTAIN VIEW, CALIFORNIA OFFICE LEASE AGREEMENT BETWEEN EOP-SHORELINE TECHNOLOGY PARK, L.L.C., a Delaware limited liability company (“LANDLORD”) AND PERLEGEN SCIENCES, INC., a Delaware corporation (“TENANT”)
Office Lease Agreement • April 10th, 2006 • Perlegen Sciences Inc • California

THIS OFFICE LEASE AGREEMENT (the “Lease”) is made and entered into as of the 26th day of September, 2001, by and between EOP-SHORELINE TECHNOLOGY PARK, L.L.C., a Delaware limited liability company (“Landlord”) and PERLEGEN SCIENCES, INC., a Delaware corporation (“Tenant”).

PERLEGEN SCIENCES, INC. SECOND AMENDED AND RESTATED STOCKHOLDERS’ AGREEMENT February 1, 2005
Stockholders Agreement • April 10th, 2006 • Perlegen Sciences Inc • Delaware

This SECOND AMENDED AND RESTATED STOCKHOLDERS’ AGREEMENT (the “Agreement) is entered into as of the 1st day of February, 2005 by and among Perlegen Sciences, Inc., a Delaware corporation (the “Company”), the investors listed on Schedule A (each an “Investor” and collectively, the “Investors”) and the purchasers listed on Schedule A hereto (each, a “Purchaser” and collectively, the “Purchasers”).

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