DAPC_analysis Sample Clauses

DAPC_analysis. Scatter plots from the DAPC analysis carried out with 133 C. canephora accessions. Discriminant axes 1 and 2 (left) and 3 and 4 (right) representing the seven groups (inertia ellipses) determined by the DAPC. The percentage of cumulative variance for the retained PCA eigenvectors (black dots), the Bayesian Information Criterion (BIC) used to determine the optimal k number of clusters (blue dot), and the F-statistic of the between/within group variance ratio for the discriminant functions (colored bars) are also shown below the DAPC plot. Figure 2 DAPC_an_supplemental Scatter plots from the DAPC analysis, showing the 347 C. canephora and 3 C. arabica “Supplemental Individuals” analyzed. Discriminant axes 1 and 2 (left) and 3 and 4 (right) representing the five groups (inertia ellipses) determined by the DAPC. Empty circles represent the “Analysis Individuals” used to identify genetic groups, while empty triangles represent interpolated “Supplemental Individuals”. Figure 3 DAPC_an_clone Scatter plots from the DAPC analysis, showing the 17 C. canephora “Clone Individuals” analyzed. Discriminant axes 1 and 2 (left) and 3 and 4 (right) representing the five groups (inertia ellipses) determined by the DAPC. Empty circles represent the “Analysis Individuals” used to identify genetic groups, while empty triangles represent interpolated “Clone Individuals”. Figure 4 DAPC_an_arabusta Scatter plots from the DAPC analysis, showing the 17 C. canephora “Arabusta Individuals” analyzed. Discriminant axes 1 and 2 (left) and 3 and 4 (right) representing the five groups (inertia ellipses) determined by the DAPC. Empty circles represent the “Analysis Individuals” used to identify genetic groups, while empty triangles represent interpolated “Arabusta Individuals”. Figure 5 Membership_probability_Analisis_Supplemental_Individuals Bar plots of the posterior membership probabilities obtained with the DAPC analysis for the “Analysis” and “Supplemental” Individuals. Names of the accessions used to identify the genetic groups are written in black, while the supplemental individuals in gray. Figure 6 Membership_probability_Analisis_Clone_Individuals Bar plots of the posterior membership probabilities obtained with the DAPC analysis for the “Analysis” and “Clone” Individuals. Names of the accessions used to identify the genetic groups are written in black, while the clone individuals in gray. Figure 7 Membership_probability_Analisis_Arabusta_Individuals Bar plots of the posterior memb...
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