CELL CYCLE CHECKPOINT PATHWAY MAPPING Sample Clauses

CELL CYCLE CHECKPOINT PATHWAY MAPPING. The protein targets identified above (Specific Aim 2 and 3.1) will be screened for additional interactions with other proteins by yeast two-hybrid technology (Appendix D). These binding proteins will be assayed for their ability to halt tumor cell progression through various cell cycle phases. Those that have function in this basic assay will be subjected to a two-hybrid screen using a combinatorial peptide library to identify specific binding peptides (Appendix F). [ * ] The isolated target-binding peptides will be assessed for their ability to inhibit cell cycle progression in tumor cells. Validated peptide hits will be subjected to secondary assays to confirm their function and specificity. This process represents a reverse of what was described earlier in Specific Aim 1 and is illustrated in the left-hand side of Figure 1.
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CELL CYCLE CHECKPOINT PATHWAY MAPPING. The second-level two-hybrid screening of protein targets that bind to peptide hits (from Specific Aim 3.1), or cell cycle control proteins selected by Xxxxxxx (Specific Aim 2.1), is referred to as functional-based pathway mapping. This will elucidate interacting members within the cell cycle [ * ] = CERTAIN CONFIDENTIAL INFORMATION CONTAINED IN THIS DOCUMENT, MARKED BY BRACKETS, HAS BEEN OMITTED AND FILED SEPARATELY WITH THE SECURITIES AND EXCHANGE COMMISSION PURSUANT TO RULE 406 OF THE SECURITIES ACT OF 1933, AS AMENDED. checkpoint control pathway. These interacting proteins will be assayed for their ability to modulate growth and progression through the cell cycle in "normal" and tumor cell lines. [ * ] These binding peptides will then be assessed for their ability to inhibit growth and cell cycle progression in tumor cells. Individual peptide hits will be subjected to secondary assays to confirm their function and specificity. This will produce additional peptide/protein pairs capable of regulating tumor growth.
CELL CYCLE CHECKPOINT PATHWAY MAPPING. The protein targets identified above (Specific Aim 2 and 3.1) will be screened for additional interactions with other proteins by yeast two-hybrid technology (Appendix D). These binding proteins will be assayed for their ability to halt tumor cell progression through various cell cycle phases. Those that have function in this basic assay will be subjected to a two-hybrid screen using a combinatorial peptide library to identify specific binding peptides (Appendix F). The two-hybrid peptide libraries contain the same peptide structures and sub-cellular localization sequences as described in Specific Aim 1 and Appendix A. The isolated target-binding peptides. will be assessed for their ability to inhibit cell cycle progression in tumor cells. Validated peptide hits will be subjected to secondary assays to confirm their function and specificity. This process represents a reverse of what was described earlier in Specific Aim 1 and is illustrated in the left-hand side of Figure 1.
CELL CYCLE CHECKPOINT PATHWAY MAPPING. The second-level two-hybrid screening of protein targets that bind to peptide hits (from Specific Aim 3.1), or cell cycle control proteins selected by Xxxxxxx (Specific Aim 2-1). is referred to as functional-based pathway mapping. This will elucidate interacting members within the cell cycle checkpoint control pathway. These interacting proteins will be assayed for their ability to modulate growth and progression through the cell cycle in "normal" and tumor cell lines. Those with function will be subjected to a, two-hybrid screen using a peptide library to identify binding peptides (Appendix F). The protocol is the same as described in Appendix E, except that peptide libraries are used instead of cDNA libraries. These binding peptides will then be assessed for their ability to inhibit growth and cell cycle progression in tumor cells. Individual peptide hits will be subjected to secondary assays to confirm their function and specificity. This will produce additional peptide/protein pairs capable of regulating tumor growth.

Related to CELL CYCLE CHECKPOINT PATHWAY MAPPING

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